Genetic code

COVID proved the therapeutic potential of RNA technology – making it more available is the next goal

Retrieved on: 
Thursday, October 26, 2023

Detailed methodology to deliver RNA vaccines to cells was also not easily available to the research community.

Key Points: 
  • Detailed methodology to deliver RNA vaccines to cells was also not easily available to the research community.
  • For these reasons we have published a protocol detailing how to make and package RNA with commercially available reagents.

How RNA therapies work

  • The concept behind RNA therapies is elegant and simple, in theory.
  • There are two distinct components: the RNA payload and the fatty envelope, made of lipid nanoparticles, which safely delivers the payload to cells.
  • Read more:
    Messenger RNA: how it works in nature and in making vaccines

    It is hard to believe now, but even in the early 2000s RNA therapies were widely considered to be a pipe dream.

Delivering the message

  • RNA is a negatively charged, unstable molecule and cannot maintain its structure in the body without some sort of protective casing.
  • It was only in the 2010s that lipid nanoparticles were developed and identified as a potential mechanism for delivery.
  • Then, before injection into the body, this assemblage is converted to a neutral pH, reducing potential toxicity in the body.

Time in the spotlight

  • By the time the COVID pandemic arrived, the essential components to make a viable RNA vaccine had emerged.
  • RNA vaccines were especially appealing as they can be rapidly synthesised in the lab using just the genetic code of the virus.
  • The result has been that labs around the world are developing their own techniques from scratch, leading to a grossly inefficient system.

The democratisation of RNA technology

  • It is a standardised technique researchers can use as a baseline for RNA therapies without the need for proprietary products.
  • This will mean more people around the world will be able to bring RNA technology into the clinic, broadening its scope, impact and safety.
  • We have only seen the tip of the iceberg in terms of the therapeutic potential of RNA technology.


This work was supported by funding from New Zealand Ministry of Business Innovation and Employment (RTVU1603 and Vac 19008), Research Trust of Victoria University of Wellington (project number 400662) and The Hugh Green Foundation.

A mystery disease hit South Africa's pine trees 40 years ago: new DNA technology has found the killer

Retrieved on: 
Thursday, October 26, 2023

In the 1970s and 1980s, pine trees growing in various forestry plantations in South Africa’s Western Cape province began to die in patches.

Key Points: 
  • In the 1970s and 1980s, pine trees growing in various forestry plantations in South Africa’s Western Cape province began to die in patches.
  • These trees succumbed to a mysterious root disease and the patches expanded gradually.
  • As in many other true crime dramas, the finger was initially pointed at the most likely suspect: the root-infecting Phytophthora cinnamomi.
  • Through a blend of perseverance, technology, and a touch of serendipity, it was possible to solve a decades-old mystery.

Tracking a killer

  • In 2020, the samples were revived by a team that included ourselves and several others who recently published a paper on the topic.
  • We sequenced the samples’ DNA to reveal their unique genetic code.
  • By comparing this code against genetic databases, it was possible to figure out exactly what was causing the tree disease.
  • And so, more than four decades after the disease was first described, the pathogen was finally identified as Rhizina undulata.

It pays to be patient

  • These fires can be accidental or due to what is known as slash-burning after trees are harvested.
  • Our work is also a testament to the timeliness of scientific progress and the importance of patience.
  • This underlines the need for continued investment into research and the development of new tools, both in South Africa and worldwide.
  • Andi Wilson receives funding from the National Research Foundation through a Scarce Skills Postdoctoral Fellowship.
  • Brenda Wingfield receives funding from South African Department of Science and Innovation.

Global and Regional Rare Disease Genetic Testing Market Analysis & Forecasts Report 2023-2033 - ResearchAndMarkets.com

Retrieved on: 
Monday, October 9, 2023

The "Rare Disease Genetic Testing Market - A Global and Regional Analysis: Focus on Disease Type, Offering, Specialty Type, Sample Type, Trait Type, Technology, Age Group, End User, and Country Analysis - Analysis and Forecast, 2023-2033" report has been added to ResearchAndMarkets.com's offering.

Key Points: 
  • The "Rare Disease Genetic Testing Market - A Global and Regional Analysis: Focus on Disease Type, Offering, Specialty Type, Sample Type, Trait Type, Technology, Age Group, End User, and Country Analysis - Analysis and Forecast, 2023-2033" report has been added to ResearchAndMarkets.com's offering.
  • The global market for rare disease genetic testing encompasses an array of panels and tests that excel in detecting rare diseases.
  • The global rare disease genetic testing market has experienced remarkable growth, driven by the escalating demand for early detection of rare diseases.
  • Moreover, a maximum number of rare disease testing is done there, due to which these regions hold the maximum share in the global rare disease genetic testing market.

Global and Regional Rare Disease Genetic Testing Market Report 2023-2033: Early Detection Demand and Innovative Systems Usher in New Era for Rare Disease Genetic Testing

Retrieved on: 
Tuesday, October 3, 2023

The global market for rare disease genetic testing encompasses an array of panels and tests that excel in detecting rare diseases.

Key Points: 
  • The global market for rare disease genetic testing encompasses an array of panels and tests that excel in detecting rare diseases.
  • Among the most prevalent rare disease genetic testing panels are those tailored for gastroenterology, endocrine and metabolic disorders, and neurological diseases.
  • The global rare disease genetic testing market has experienced remarkable growth, driven by the escalating demand for early detection of rare diseases.
  • Moreover, a maximum number of rare disease testing is done there, due to which these regions hold the maximum share in the global rare disease genetic testing market.

New species of cobra-like snake discovered – but it may already be extinct

Retrieved on: 
Monday, October 2, 2023

However, recent advances in DNA extraction techniques mean that biologists can study the genetic code of old museum specimens, which include extremely rare or even recently extinct species.

Key Points: 
  • However, recent advances in DNA extraction techniques mean that biologists can study the genetic code of old museum specimens, which include extremely rare or even recently extinct species.
  • We harnessed this new technology to study a snake from the Eastern Highlands of Zimbabwe that was run over in 1982, and discovered it was a new species.
  • This snake had unusual markings with red skin between its scales, creating the effect of black dots on a red background when its hood is extended.

A rare find

    • A handful of specimens were observed and measured in later years, but the landscape has been drastically altered by forestry.
    • The rinkhals from Zimbabwe has not been seen in the wild since 1988 and is feared to be extinct.
    • This population lives 700km away from other, more southerly populations, which made us suspect it may be a separate species.

New technology

    • Our study showed they represent a long-isolated population, highly distinct from the southern rinkhals populations.
    • Based on their genetic divergence from the other rinkhals, we estimate that the snakes in Zimbabwe diverged from their southern relatives 7-14 million years ago.
    • Hemachatus nyangensis has fangs modified to spit venom, although the behaviour was not reported from the few recorded interactions with humans.

A connection between human and snake evolution

    • Similarly, the venom spitting in Asian cobras is thought to have emerged around 2.5 million years ago, which is around the time the extinct human species Homo erectus would have become a threat to those species.
    • Our study of Nyanga rinkhals suggests that the third time venom spitting evolved independently in snakes may also have coincided with the origin of upright-walking hominins.
    • Technological advances may be giving us incredible insights into ancient animal lineages but they can’t make up for an extinction.
    • The possible relationship between venom spitting and our early ancestors is a reminder that we are part of the Earth’s ecosystem.

CancerVAX Expands Development Pipeline to Include a Universal CAR-T Cell Platform

Retrieved on: 
Tuesday, September 12, 2023

Conventional CAR-T Cell therapy can cost more than $500,000 per dose due to complicated and expensive lab processes.

Key Points: 
  • Conventional CAR-T Cell therapy can cost more than $500,000 per dose due to complicated and expensive lab processes.
  • As a result, the Company has decided to expand its development pipeline to include a “Universal CAR-T Platform”.
  • Universal Cancer Vaccine​ Platform – A novel and customizable Universal Cancer Vaccine (UCV), to be delivered as a shot, that can uniquely detect, mark and kill only cancer cells.
  • Ryan Davies, CEO of CancerVAX commented, “CAR-T cell therapy is one of the more promising immunotherapies entering the mainstream of cancer treatment.

Dogs don't see life through rose-coloured glasses, nor in black and white

Retrieved on: 
Monday, September 4, 2023

For a few months now, I’ve been treating six-year-old Samuel, who has the beginnings of myopia.

Key Points: 
  • For a few months now, I’ve been treating six-year-old Samuel, who has the beginnings of myopia.
  • He’s very quick for his age and often asks me questions about tests I give him, and about what I see inside his eyes.
  • However, as an optometrist, I can offer some insights that might help answer Samuel’s question.

Cones and rods

    • The retina, the sensitive part that lines the back of the eye, has two types of photon receptors: cones and rods.
    • The cones, in the centre of the retina (fovea), perceive bright light and are responsible for colour perception.
    • There are three types of cones.
    • The brain combines the signals emitted by each of these cones to form the colour it perceives.

And what about animals?

    • For example, birds have a fourth opsin that allows them to see ultraviolet (UV) light.
    • Humans cannot perceive this light because our crystalline (internal) lens filters UV rays.
    • UV rays influence birds’ behavioural decisions, including foraging and their choice of a mate.
    • This is an advantage when it comes to spotting prey, as they can distinguish their heat even at night.

Back to Scotch

    • The vision of dogs — such as our friend Scotch — is quite different.
    • As a result, dogs have a wider field of vision (250 to 280 degrees), but less simultaneous vision.
    • This is equivalent to the vision of a very myopic person not wearing glasses.
    • And as an added bonus, they have an extra layer of the retina, called the tapetum lucidum — or carpet.
    • So it’s possible, depending on the colour of the ball, that Scotch will not see it, and as a result, will gaze up at Samuel with a lost look.

Unveiling the enigmatic world of moths: from ancient pollinators to whistling wonders

Retrieved on: 
Sunday, September 3, 2023

Or worse, do you have an irrational fear of moths?

Key Points: 
  • Or worse, do you have an irrational fear of moths?
  • Would it surprise you to learn moths are not the poor cousin of butterflies?
  • Moths vary enormously in their size, what they like to eat, how they reproduce and how they live their lives.

Life arising from biological soup


    Remember the story of The Very Hungry Caterpillar? The life cycle begins with a little egg that hatches into a caterpillar, eats its way through a rainbow of food and then builds a cocoon for a complete transformation into a beautiful butterfly. This is complete metamorphosis, where the structure of the caterpillar dissolves into a biological soup and then into an adult that looks nothing like the original.

Are butterflies just ‘flamboyant’ moths?

    • A few defining features separate moths from butterflies.
    • But these features actually don’t separate all moths from butterflies, just night-flyers (nocturnal) from day-flyers.
    • There are 125 families of moths and just six families of butterflies.
    • These are definitely moth features but their genetic code suggests they are most closely related to butterflies.

Moths helped flowering plants evolve

    • That makes moths twice as old as butterflies.
    • This suggests these ancient moths contributed to the success of the first flowering plants.
    • This means moths are not only the night-shift pollinator, they’re also more efficient than the daytime bee pollinators we hear most about.

The big and small of it

    • The largest moth is the Hercules moth from northern Queensland in Australia with a wingspan of 361mm.
    • One common species is thought to hold the world record for the number of eggs carried at around 44,000.
    • The caterpillar growing phase may take many years in the ground and yet the adults only live for around a single day.

Some moths can hear

    • That’s right, some moths can hear sound.
    • These organs can help the moths detect bats, who hunt moths at night, so it is no surprise that three of the largest moths all have tympanic organs.
    • Although most moths use chemicals and pheromones to attract a mate, whistling moths use sound.
    • So next time you’re out for a walk, or spending time in your garden, day or night, look out for moths.

What can cities do to correct racism and help all communities live longer? It starts with city planning

Retrieved on: 
Tuesday, August 29, 2023

But this range varies widely – a child raised in wealthy San Mateo County, California, can expect to live nearly 85 years.

Key Points: 
  • But this range varies widely – a child raised in wealthy San Mateo County, California, can expect to live nearly 85 years.
  • A child raised in Fort Worth, Texas, could expect to live about 66.7 years.
  • This means that a person’s ZIP code is often a better predictor of their life expectancy than their genetic code.
  • The air people breathe, the streets they walk, and their general sense of safety and happiness are all shaped by city and town plans.

Brief history of environmental justice

    • Environmental justice stems from a 1980s social movement that protested toxic waste being dumped in predominantly Black neighborhoods in the South.
    • The Biden administration, for example, convened an environmental justice advisory council in 2021 to track local disparities in health, environmental and economic impacts.
    • But environmental justice progress ultimately depends on local work.

California’s housing policies

    • Los Angeles, for example, has exclusionary zoning policies that can make it harder for low-income people to purchase homes in particular neighborhoods.
    • The zoning policies require the construction of single family homes with large yards in many neighborhoods.
    • For example, Inglewood’s 2020 plan adopts an inclusionary zoning policy to construct affordable housing in the same locations as market-rate housing.
    • Other places in California, like the the city of Richmond, have introduced a Health in All Policies approach to combat inequality.

Analyzing California city plans

    • We collected over 500 finalized California city plans from 2020 through 2022.
    • Plans are required to be updated every three to eight years, but we found that some places are still running on plans drafted in the 1970s.
    • City plans are often hard to find on individual city and county websites – or they are buried in the shelves of municipal libraries.
    • Local communities spend years in public meetings finessing the details of city plans.

Addressing environmental justice

    • We also searched for synonyms, like segregation, that address environmental justice and anti-racism.
    • Through this, we uncovered the various ways that some California cities addressed environmental justice.
    • Ultimately, the answer to how cities can plan to be anti-racist, address health equity or promote environmental justice rests with concerned constituents and council members crafting a feasible plan of action.

New research reveals that Ötzi the iceman was bald and probably from a farming family – what else can DNA uncover?

Retrieved on: 
Thursday, August 24, 2023

This amazing find would subsequently become known as Ötzi the Iceman.

Key Points: 
  • This amazing find would subsequently become known as Ötzi the Iceman.
  • His body and belongings were extensively studied, prompting numerous questions: what was he doing here?
  • His unique preservation enabled the sequencing of Ötzi’s whole genome – the complete “instruction booklet” for building a human.
  • But it was enough for a team led by Turi King at the University of Leicester to extract fragments of DNA from them.

Crime scene samples

    • Sequencing a genome, which comprises billions of DNA bases, enables scientists to evaluate regions of the human genome that contribute to appearance.
    • For more than 30 years, forensic scientists have looked at specific highly variable regions in DNA to match these to crime scene samples, or to relatives of a suspect or victim.
    • So how likely is it that DNA from such a sample could accurately paint a picture of me?
    • Can forensic scientists build a kind of identikit photo from a crime scene DNA sample?
    • Hair colour can be predicted from DNA, but darker shades of hair are more accurately predicted than blonde hair.

Environmental factors

    • Commercially sold laboratory kits such as Hirisplex can simultaneously evaluate several DNA regions to predict the hair and eye colour from a biological sample.
    • However, unlike eye colour, hair colour prediction from DNA is only of value until midlife, when the natural processes of ageing lead to greying or white hair.
    • These processes also lead to hair loss in some people and more than 300 gene variants have been linked to baldness.
    • More representative data from the rest of the world will therefore enhance studies in forensic archaeology, such as the Ötzi research.